From ayoubi at bmb-fs1.biochem.okstate.edu Thu Feb 5 23:20:10 2004 From: ayoubi at bmb-fs1.biochem.okstate.edu (Patricia Ayoubi) Date: Tue Mar 23 20:25:30 2004 Subject: [Okmicroarray] NCBI Field Guide and Workshop Message-ID: <1136077626-37500045@biochem.okstate.edu> Dear Colleagues, Event: A Field Guide to GenBank and NCBI Molecular Biology Resources Date: Monday and Tuesday, March 15-16, 2004 Location: 313 and 407 Classroom Building Registration: http://fp.okstate.edu/ayoubi/OMCF/NCBIFieldGuide.html During Spring Break 2004, Oklahoma State University Bioinformatics Group and the Department of Biochemistry and Molecular Biology will host a course entitled "A Field Guide to GenBank and NCBI Molecular Biology Resources". The goal of the course will be to introduce the latest bioinformatics resources that have been developed by the NCBI. "A Field Guide to GenBank and NCBI Molecular Biology Resources", runs for two days and includes a lecture and hands-on computer workshop. This course is intended for faculty, students, and staff at Oklahoma State University, as well as those from other regional institutions, who are interested in learning what is available from NCBI and how to use the free tools they provide for sequence and genome analysis, molecular biology, and molecular modeling. Space is limited to the first 100 registrants. The course will be given by instructors from NCBI. For more detailed information about the course content, visit their site at http://www.ncbi.nlm.nih.gov/Class/FieldGuide The lecture will run for three hours, 9AM-12PM on March 15 and is open to all that register. After lunch, the hands-on sessions begin with smaller groups of 25 participants from 1-3 and 3:15-5:15 and continue the second day with more hands on sessions as needed to accommodate everyone in the class. In addition to the workshop, the instructors will also be available for one-on-one consultations with individual PIs or groups to discuss specific research questions in greater detail. These individual sessions will be scheduled after the final Computer Workshop, are generally 20-30 minutes in length and must be arranged in advance. If you are interested in scheduling an individual session, please indicate this as a comment on the registration form. The course is free and registration is required (http://fp.okstate.edu/ayoubi/OMCF/NCBIFieldGuide.html). The Computer Workshop sessions are redundant and optional, but attendance is restricted to those who registered for and attended the lecture. Due to the limited number of workstations, each hands-on workshop session will be limited to 25 attendees. (My apologies if you receive multiple copies of this message due to posting on various mailing lists and e-groups.) Best Regards, Trish _________________ Patricia Ayoubi, Ph.D. Microarray Core Facility Department of Biochemistry and Molecular Biology Oklahoma State University 348E Noble Research Center Stillwater, OK 74078 Phone: 405-744-6209 Fax: 405-744-7799 Email: ayoubi@okstate.edu http://microarray.okstate.edu -------------- next part -------------- An HTML attachment was scrubbed... URL: http://lists.onenet.net/pipermail/okmicroarray/attachments/20040205/3904bf6d/attachment.htm From ayoubi at bmb-fs1.biochem.okstate.edu Wed Feb 25 20:07:59 2004 From: ayoubi at bmb-fs1.biochem.okstate.edu (Patricia Ayoubi) Date: Tue Mar 23 20:25:30 2004 Subject: [Okmicroarray] Reminder: NCBI Field Guide and Workshop Message-ID: <1134361154-24882255@biochem.okstate.edu> Dear Colleagues, . Seats are still available for the NCBI Workshop to be held March 15-16 on the OSU-Stillwater campus so please sign-up if you wish to attend (http://fp.okstate.edu/ayoubi/OMCF/NCBIFieldGuide.html. Also, if you are interested in scheduling a one-on-one consultation between with your group and the NCBI instructors, please indicate this as a comment on the registration form. If you have already registered and would like to schedule a one-on-one consultation please send me an email (ayoubi@okstate.edu). Please alert any colleagues, students, and other individuals that may be interested in attending. The original message is below for your convenience. Event: A Field Guide to GenBank and NCBI Molecular Biology Resources Date: Monday and Tuesday, March 15-16, 2004 Location: 313 and 407 Classroom Building Registration: http://fp.okstate.edu/ayoubi/OMCF/NCBIFieldGuide.html During Spring Break 2004, Oklahoma State University Bioinformatics Group and the Department of Biochemistry and Molecular Biology will host a course entitled "A Field Guide to GenBank and NCBI Molecular Biology Resources". The goal of the course will be to introduce the latest bioinformatics resources that have been developed by the NCBI. "A Field Guide to GenBank and NCBI Molecular Biology Resources", runs for two days and includes a lecture and hands-on computer workshop. This course is intended for faculty, students, and staff at Oklahoma State University, as well as those from other regional institutions, who are interested in learning what is available from NCBI and how to use the free tools they provide for sequence and genome analysis, molecular biology, and molecular modeling. Space is limited to the first 100 registrants. The course will be given by instructors from NCBI. For more detailed information about the course content, visit their site at http://www.ncbi.nlm.nih.gov/Class/FieldGuide The lecture will run for three hours, 9AM-12PM on March 15 and is open to all that register. After lunch, the hands-on sessions begin with smaller groups of 25 participants from 1-3 and 3:15-5:15 and continue the second day with more hands on sessions as needed to accommodate everyone in the class. In addition to the workshop, the instructors will also be available for one-on-one consultations with individual PIs or groups to discuss specific research questions in greater detail. These individual sessions will be scheduled after the final Computer Workshop, are generally 20-30 minutes in length and must be arranged in advance. If you are interested in scheduling an individual session, please indicate this as a comment on the registration form. The course is free and registration is required (http://fp.okstate.edu/ayoubi/OMCF/NCBIFieldGuide.html). The Computer Workshop sessions are redundant and optional, but attendance is restricted to those who registered for and attended the lecture. Due to the limited number of workstations, each hands-on workshop session will be limited to 25 attendees. (My apologies if you receive multiple copies of this message due to posting on various mailing lists and e-groups.) Best Regards, Trish _________________ Patricia Ayoubi, Ph.D. Microarray Core Facility Department of Biochemistry and Molecular Biology Oklahoma State University 348E Noble Research Center Stillwater, OK 74078 Phone: 405-744-6209 Fax: 405-744-7799 Email: ayoubi@okstate.edu http://microarray.okstate.edu -------------- next part -------------- An HTML attachment was scrubbed... URL: http://lists.onenet.net/pipermail/okmicroarray/attachments/20040225/23b9016c/attachment.htm From yuriy-gusev at ouhsc.edu Wed Mar 3 17:52:02 2004 From: yuriy-gusev at ouhsc.edu (Gusev, Yuriy (HSC)) Date: Tue Mar 23 20:25:30 2004 Subject: [Okmicroarray] RE: GENOMICS / PROTEOMICS / BIOINFORMATICS DISCUSSION GROUP Message-ID: <5B9E6913CEC0D844A779A85615D3D11E0A9727AA@PARADOX.hsc.net.ou.edu> Subject: FW: GENOMICS / PROTEOMICS / BIOINFORMATICS DISCUSSION GROUP Dear Colleagues Speakers have been scheduled for the next three meetings of our Discussion Group sponsored by the Department of Microbiology & Immunology and the Department of Surgery and serving as a forum for BRIN participants and the OU Cancer Center. The next meeting will be held at 2:00 pm on Wednesday, March 31, 2003 in the Biomedical Research Center, Room 109 located at 975 NE 10th St. We are pleased to announce that under the leadership of Yuriy Gusev, PhD and Jonathan Wren, PhD the process has been initiated to establish the Oklahoma Bioinformatics Society (OKBIOS). OKBIOS is a chapter of the Mid-South Computational Biology and Bioinformatics Society (MCBIOS). They will also be applying for the status of regional affiliate with the International Society for Computational Biology (ISCB) at a later date. There will be more regarding this at our meeting at the end of this month. If anyone would like further information about this before the next meeting please contact either Yuriy or Jonathan The presentation this month will be by: Jonathan Wren, Ph.D. Research Assistant Professor Advanced Center for Genome Technology (ACGT), Department of Botany and Microbiology University of Oklahoma / Norman Title: Data-mining MEDLINE - a Model for Knowledge Discovery Summary: A defining feature of modern biomedical research is the explosion of data and information. This explosion has been generated in part by high-throughput technologies as well as the advancement of computational technologies and communications networks, gradually shifting the paradigm of biomedical research from the gathering of data to the location, assimilation and modeling of data. The scientific literature has been and remains the principle means by which scientific discoveries are reported, containing a wealth of information in a highly unstructured and unstandardized format. The amount of literature in MEDLINE is also growing exponentially, making a broad awareness of any one field difficult and knowledge of potentially relevant developments in other fields highly unlikely. Computational technology is well suited to handle this explosion of data and information, but poorly suited to make sense of it as humans do. A program called IRIDESCENT has been developed in an attempt to bridge this gap in human awareness. IRIDESCENT attempts to identify researched entities within MEDLINE records such as genes, diseases, phenotypes and drugs, find relationships between them, model them within a network, identify commonalities among these variables and infer new relations based upon known ones. So far, IRIDESCENT has had several successful applications. The speaker April 28th will be Lloyd W. Sumner, Ph.D.; Staff Scientist & Head, Biological Mass Spectrometry; T he Noble Foundation; Ardmore, OK 73401 For further information please call Darrin Akins at 46640 or Daniel J. Brackett at 12108. We look forward to seeing you there. Daniel J. Brackett Darrin R. Akins, Ph.D. Professor & Director of Research Assistant Professor Department of Surgery Dept. of Microbiology and Immunology University of Oklahoma Health Sciences Center Univ. of Oklahoma Health Sciences Center Tel: (405) 271-8668 e-mail: Research Physiologist FAX: (405) 271-3117 VA Medical Center darrin-akins@ouhsc.edu From management at onenet.net Thu Mar 4 04:23:15 2004 From: management at onenet.net (management@onenet.net) Date: Tue Mar 23 20:25:30 2004 Subject: [Okmicroarray] Important notify about your e-mail account. 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